addentropy.cpp File Reference

#include "mysql++.h"
#include <string>
#include "bioseq.h"
#include "dynaln.h"
#include <math.h>
#include <fstream>

Functions
pair< double, double >	computeZvalue (Protein &p1, Protein &p2, int n, ostream &ous)
pair< double, double >	avgstd (vector< double > nums)
void	createTmpTable (const string &tab, mysqlpp::Connection &conn)
int	main (int argc, char *argv[])

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Function Documentation

pair<double,double> avgstd

(

vector< double >

nums

)

pair< double, double > computeZvalue	(	Protein &	p1,
		Protein &	p2,
		int	n,
		ostream &	ous
	)

References Dynaln::getIdentity(), Dynaln::printAlign(), bioseq::randomize(), Dynaln::runglobal(), and Dynaln::setSeq().

void createTmpTable	(	const string &	tab,
		mysqlpp::Connection &	conn
	)

int main	(	int	argc,
		char *	argv[]
	)

insq << "insert into " << entmptab << " values(%0, %1q, %2, %3, %4, %5)";

References bioseq::computeEntropy(), computeZvalue(), passwd, string(), and user.